FElupe documentation#

FElupe is a Python 3.9+ 🐍 finite element analysis package 📦 focusing on the formulation and numerical solution of nonlinear problems in continuum mechanics of solid bodies 🔧. This package is intended for scientific research 💻, but is also suitable for running nonlinear simulations 🚂 in general 🏎️. In addition to the transformation of general weak forms into sparse vectors and matrices, FElupe provides an efficient high-level abstraction layer for the simulation of the deformation of solid bodies.

🏃 Beginner’s Guide

New to FElupe? The Beginner’s Guide contains an introduction to the concept of FElupe.

Beginner’s Guide
📖 API reference

The reference guide contains a detailed description of the FElupe API. It describes how the methods work and which parameters can be used. Requires an understanding of the key concepts.

API Reference
☎ How-To

Step-by-step guides for specific tasks or problems with a focus on practical usability instead of completeness. Requires an understanding of the key concepts.

How-To Guides
📚 Examples

A gallery of examples.

Examples

Highlights

Installation#

Install Python, fire up 🔥 a terminal and run 🏃

https://img.shields.io/pypi/v/felupe.svg
pip install felupe[all]

where [all] is a combination of [autodiff,io,parallel,plot,progress,view] and installs all optional dependencies. FElupe has minimal requirements, all available at PyPI supporting all platforms.

  • numpy for array operations

  • scipy for sparse matrices

In order to make use of all features of FElupe 💎💰💍👑💎, it is suggested to install all optional dependencies.

  • einsumt for parallel (threaded) assembly

  • jax for automatic differentiation in material formulations (JAX-based)

  • h5py for writing XDMF result files

  • matplotlib for plotting graphs

  • meshio for mesh-related I/O

  • pyvista for interactive visualizations

  • tensortrax for automatic differentiation in material formulations (NumPy-based)

  • tqdm for showing progress bars during job evaluations

The development version may contain not yet released bug fixes and features. Consider using the --user option to install the package into your home directory (see pip documentation for more details). To install FElupe from the latest development branch, use

pip install git+https://github.com/adtzlr/felupe.git@main

or clone the repository and install the package in editable mode.

git clone https://github.com/adtzlr/felupe.git
cd felupe
pip install --editable .

Extension Packages#

The capabilities of FElupe may be enhanced with extension packages created by the community.

Package

Description

hyperelastic

Constitutive hyperelastic material formulations

matadi

Material Definition with Automatic Differentiation (AD)

tensortrax

Differentiable Tensors based on NumPy Arrays (bundled with FElupe)

feplot

A visualization tool for FElupe

Performance#

This is a simple benchmark to compare assembly times for linear elasticity and hyperelasticity on tetrahedrons.

_images/benchmark.png

Analysis

DOF/s

Linear-Elastic

130039 +/-23464

Hyperelastic

116819 +/-21979

Tested on: Windows 10, Python 3.11, Intel® Core™ i7-11850H @ 2.50GHz, 32GB RAM.

from timeit import timeit

import matplotlib.pyplot as plt
import numpy as np

import felupe as fem


def pre_linear_elastic(n, **kwargs):
   mesh = fem.Cube(n=n).triangulate()
   region = fem.RegionTetra(mesh)
   field = fem.FieldContainer([fem.Field(region, dim=3)])
   umat = fem.LinearElastic(E=1, nu=0.3)
   solid = fem.SolidBody(umat, field)
   return mesh, solid


def pre_hyperelastic(n, **kwargs):
   mesh = fem.Cube(n=n).triangulate()
   region = fem.RegionTetra(mesh)
   field = fem.FieldContainer([fem.Field(region, dim=3)])
   umat = fem.NeoHookeCompressible(mu=1.0, lmbda=2.0)
   solid = fem.SolidBody(umat, field)
   return mesh, solid


print("# Assembly Runtimes")
print("")
print("|   DOF   | Linear-Elastic in s | Hyperelastic in s |")
print("| ------- | ------------------- | ----------------- |")

points_per_axis = np.round((np.logspace(3, 5, 6) / 3)**(1 / 3)).astype(int)

number = 3
parallel = False

runtimes = np.zeros((len(points_per_axis), 2))

for i, n in enumerate(points_per_axis):
   mesh, solid = pre_linear_elastic(n)
   matrix = solid.assemble.matrix(parallel=parallel)
   time_linear_elastic = (
      timeit(lambda: solid.assemble.matrix(parallel=parallel), number=number) / number
   )

   mesh, solid = pre_hyperelastic(n)
   matrix = solid.assemble.matrix(parallel=parallel)
   time_hyperelastic = (
      timeit(lambda: solid.assemble.matrix(parallel=parallel), number=number) / number
   )

   runtimes[i] = time_linear_elastic, time_hyperelastic

   print(
      f"| {mesh.points.size:7d} | {runtimes[i][0]:19.2f} | {runtimes[i][1]:17.2f} |"
   )

dofs_le = points_per_axis ** 3 * 3 / runtimes[:, 0]
dofs_he = points_per_axis ** 3 * 3 / runtimes[:, 1]

print("")
print("| Analysis       |        DOF/s      |")
print("| -------------- | ----------------- |")
print(
   f"| Linear-Elastic |   {np.mean(dofs_le):5.0f} +/-{np.std(dofs_le):5.0f}  |"
)
print(f"| Hyperelastic   |   {np.mean(dofs_he):5.0f} +/-{np.std(dofs_he):5.0f}  |")

plt.figure()
plt.loglog(
   points_per_axis ** 3 * 3,
   runtimes[:, 1],
   "C0",
   label=r"Stiffness Matrix (Hyperelastic)",
)
plt.loglog(
   points_per_axis ** 3 * 3,
   runtimes[:, 0],
   "C1--",
   label=r"Stiffness Matrix (Linear-Elastic)",
)
plt.xlabel(r"Number of degrees of freedom $\longrightarrow$")
plt.ylabel(r"Runtime in s $\longrightarrow$")
plt.legend()
plt.tight_layout()
plt.savefig("benchmark.png")

License#

FElupe - Finite Element Analysis (C) 2021-2024 Andreas Dutzler, Graz (Austria).

This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see https://www.gnu.org/licenses/.

Indices and tables#